A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv820181



Internal ID15238146
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:58675542..58676929hg38UCSC Ensembl
Innerchr1:59141214..59142601hg19UCSC Ensembl
Innerchr1:58913802..58915189hg18UCSC Ensembl
Cytoband1p32.1
Allele length
AssemblyAllele length
hg381388
hg191388
hg181388
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419252
SamplesAK1
Known GenesMYSM1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv820181
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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