A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv820153



Internal ID15584854
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:3840029..3895108hg38UCSC Ensembl
InnerchrY:3708070..3763149hg19UCSC Ensembl
InnerchrY:3768070..3823149hg18UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg3855080
hg1955080
hg1855080
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418750
SamplesAK1
Known Genes
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv820153
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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