A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv820138



Internal ID15238103
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:77431791..77432305hg38UCSC Ensembl
Innerchr5:76727616..76728130hg19UCSC Ensembl
Innerchr5:76763372..76763886hg18UCSC Ensembl
Cytoband5q13.3
Allele length
AssemblyAllele length
hg38515
hg19515
hg18515
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418978
SamplesAK1
Known GenesWDR41
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv820138
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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