A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv820131



Internal ID15584832
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:195663482..195667406hg38UCSC Ensembl
Innerchr2:196528206..196532130hg19UCSC Ensembl
Innerchr2:196236451..196240375hg18UCSC Ensembl
Cytoband2q32.3
Allele length
AssemblyAllele length
hg383925
hg193925
hg183925
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419589
SamplesAK1
Known GenesSLC39A10
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv820131
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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