A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv820095



Internal ID15238060
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr18:31897503..31901106hg38UCSC Ensembl
Innerchr18:29477466..29481069hg19UCSC Ensembl
Innerchr18:27731464..27735067hg18UCSC Ensembl
Cytoband18q12.1
Allele length
AssemblyAllele length
hg383604
hg193604
hg183604
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419563
SamplesAK1
Known GenesTRAPPC8
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv820095
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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