A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv820093



Internal ID15238058
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:107743167..107744511hg38UCSC Ensembl
Innerchr12:108136944..108138288hg19UCSC Ensembl
Innerchr12:106661074..106662418hg18UCSC Ensembl
Cytoband12q23.3
Allele length
AssemblyAllele length
hg381345
hg191345
hg181345
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419241
SamplesAK1
Known GenesPRDM4
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv820093
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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