A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv820086



Internal ID15584787
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:20287610..20298400hg38UCSC Ensembl
Innerchr10:20576539..20587329hg19UCSC Ensembl
Innerchr10:20616545..20627335hg18UCSC Ensembl
Cytoband10p12.31
Allele length
AssemblyAllele length
hg3810791
hg1910791
hg1810791
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418597
SamplesAK1
Known GenesPLXDC2
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv820086
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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