A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv820043



Internal ID15238008
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:4810769..4814353hg38UCSC Ensembl
Innerchr17:4714064..4717648hg19UCSC Ensembl
Innerchr17:4661032..4664614hg18UCSC Ensembl
Cytoband17p13.2
Allele length
AssemblyAllele length
hg383585
hg193585
hg183583
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419561
SamplesAK1
Known GenesPLD2
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv820043
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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