A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819829



Internal ID15237794
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr18:58711932..58715121hg38UCSC Ensembl
Innerchr18:56379164..56382353hg19UCSC Ensembl
Innerchr18:54530144..54533333hg18UCSC Ensembl
Cytoband18q21.32
Allele length
AssemblyAllele length
hg383190
hg193190
hg183190
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419518
SamplesAK1
Known GenesMALT1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819829
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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