A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819799



Internal ID15237764
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr13:32341171..32341413hg38UCSC Ensembl
Innerchr13:32915308..32915550hg19UCSC Ensembl
Innerchr13:31813308..31813550hg18UCSC Ensembl
Cytoband13q13.1
Allele length
AssemblyAllele length
hg38243
hg19243
hg18243
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419425
SamplesAK1
Known GenesBRCA2
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819799
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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