A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819777



Internal ID15584478
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr21:42479994..42486511hg38UCSC Ensembl
Innerchr21:43900104..43906621hg19UCSC Ensembl
Innerchr21:42773173..42779690hg18UCSC Ensembl
Cytoband21q22.3
Allele length
AssemblyAllele length
hg386518
hg196518
hg186518
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419780
SamplesAK1
Known GenesRSPH1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819777
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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