A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819770



Internal ID15584471
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20336425..22080947hg38UCSC Ensembl
Innerchr15:20541678..22368898hg19UCSC Ensembl
Innerchr15:18801692..19870262hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381744523
hg191827221
hg181068571
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418809
SamplesAK1
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, POTEB, POTEB2
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819770
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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