A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819728



Internal ID15237693
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:23118239..23122680hg38UCSC Ensembl
Innerchr1:23444732..23449173hg19UCSC Ensembl
Innerchr1:23317319..23321760hg18UCSC Ensembl
Cytoband1p36.12
Allele length
AssemblyAllele length
hg384442
hg194442
hg184442
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419637
SamplesAK1
Known GenesLUZP1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819728
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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