A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819649



Internal ID15237614
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:50289642..50291896hg38UCSC Ensembl
Innerchr15:50581839..50584093hg19UCSC Ensembl
Innerchr15:48369131..48371385hg18UCSC Ensembl
Cytoband15q21.2
Allele length
AssemblyAllele length
hg382255
hg192255
hg182255
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419410
SamplesAK1
Known GenesGABPB1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819649
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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