A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819609



Internal ID15237574
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:36732782..36741166hg38UCSC Ensembl
Innerchr6:36700559..36708943hg19UCSC Ensembl
Innerchr6:36808537..36816921hg18UCSC Ensembl
Cytoband6p21.2
Allele length
AssemblyAllele length
hg388385
hg198385
hg188385
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419868
SamplesAK1
Known GenesCPNE5, RAB44
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819609
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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