A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819520



Internal ID15584221
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:75527112..75573540hg38UCSC Ensembl
Innerchr15:75819453..75865881hg19UCSC Ensembl
Innerchr15:73606508..73652936hg18UCSC Ensembl
Cytoband15q24.2
Allele length
AssemblyAllele length
hg3846429
hg1946429
hg1846429
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418742
SamplesAK1
Known GenesPTPN9
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819520
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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