A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819509



Internal ID15584210
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:135795368..135797621hg38UCSC Ensembl
Innerchr6:136116506..136118759hg19UCSC Ensembl
Innerchr6:136158199..136160452hg18UCSC Ensembl
Cytoband6q23.3
Allele length
AssemblyAllele length
hg382254
hg192254
hg182254
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419408
SamplesAK1
Known GenesMIR548H4
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819509
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer