A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819455



Internal ID15237420
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:57257137..57257526hg38UCSC Ensembl
Innerchr17:55334498..55334887hg19UCSC Ensembl
Innerchr17:52689497..52689886hg18UCSC Ensembl
Cytoband17q22
Allele length
AssemblyAllele length
hg38390
hg19390
hg18390
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418933
SamplesAK1
Known GenesMSI2
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819455
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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