A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819404



Internal ID15237369
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:52255977..52258497hg38UCSC Ensembl
Innerchr10:54015737..54018257hg19UCSC Ensembl
Innerchr10:53685743..53688263hg18UCSC Ensembl
Cytoband10q21.1
Allele length
AssemblyAllele length
hg382521
hg192521
hg182521
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419440
SamplesAK1
Known GenesPRKG1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819404
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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