A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819380



Internal ID15237345
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:88685834..88687028hg38UCSC Ensembl
Innerchr16:88752242..88753436hg19UCSC Ensembl
Innerchr16:87279743..87280937hg18UCSC Ensembl
Cytoband16q24.3
Allele length
AssemblyAllele length
hg381195
hg191195
hg181195
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419194
SamplesAK1
Known GenesSNAI3, SNAI3-AS1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819380
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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