A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819349



Internal ID15584050
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:32552780..32578920hg38UCSC Ensembl
Innerchr6:32520557..32546697hg19UCSC Ensembl
Innerchr6:32628535..32654675hg18UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3826141
hg1926141
hg1826141
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418703
SamplesAK1
Known GenesHLA-DRB1, HLA-DRB6
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819349
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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