A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819332



Internal ID15584033
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:160181904..160183404hg38UCSC Ensembl
Innerchr1:160151694..160153194hg19UCSC Ensembl
Innerchr1:158418318..158419818hg18UCSC Ensembl
Cytoband1q23.2
Allele length
AssemblyAllele length
hg381501
hg191501
hg181501
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419276
SamplesAK1
Known GenesATP1A4
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819332
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer