A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819281



Internal ID8550971
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:23603209..23611345hg38UCSC Ensembl
Innerchr16:23614530..23622666hg19UCSC Ensembl
Innerchr16:23522031..23530167hg18UCSC Ensembl
Cytoband16p12.1
Allele length
AssemblyAllele length
hg388137
hg198137
hg188137
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419857
SamplesAK1
Known GenesPALB2
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819281
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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