A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819280



Internal ID15237245
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:14914934..15031305hg38UCSC Ensembl
Innerchr16:15008791..15125162hg19UCSC Ensembl
Innerchr16:14916292..15032663hg18UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg38116372
hg19116372
hg18116372
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418774
SamplesAK1
Known GenesLOC100288162, MIR1972-1, MIR1972-2, MIR6511A-2, MIR6770-2, NPIPA1, PDXDC1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819280
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer