A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819236



Internal ID15583937
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:139506866..139507298hg38UCSC Ensembl
Innerchr4:140428020..140428452hg19UCSC Ensembl
Innerchr4:140647470..140647902hg18UCSC Ensembl
Cytoband4q31.1
Allele length
AssemblyAllele length
hg38433
hg19433
hg18433
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418952
SamplesAK1
Known GenesSETD7
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819236
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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