A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819225



Internal ID15583926
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr20:34713328..34715327hg38UCSC Ensembl
Innerchr20:33301132..33303131hg19UCSC Ensembl
Innerchr20:32764793..32766792hg18UCSC Ensembl
Cytoband20q11.22
Allele length
AssemblyAllele length
hg382000
hg192000
hg182000
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419366
SamplesAK1
Known GenesNCOA6, TP53INP2
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819225
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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