A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819213



Internal ID15583914
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:22984897..23012480hg38UCSC Ensembl
Innerchr1:23311390..23338973hg19UCSC Ensembl
Innerchr1:23183977..23211560hg18UCSC Ensembl
Cytoband1p36.12
Allele length
AssemblyAllele length
hg3827584
hg1927584
hg1827584
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418711
SamplesAK1
Known GenesC1orf234
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819213
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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