A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819201



Internal ID15237166
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr13:52563355..52666195hg38UCSC Ensembl
Innerchr13:53137490..53240330hg19UCSC Ensembl
Innerchr13:52035491..52138331hg18UCSC Ensembl
Cytoband13q14.3
Allele length
AssemblyAllele length
hg38102841
hg19102841
hg18102841
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418768
SamplesAK1
Known GenesHNRNPA1L2, SUGT1, TPTE2P3
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819201
Frequency
Sample Size2
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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