A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819176



Internal ID15237141
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:142715598..142761122hg38UCSC Ensembl
Innerchr7:142423425..142468971hg19UCSC Ensembl
Innerchr7:142103004..142148546hg18UCSC Ensembl
Cytoband7q34
Allele length
AssemblyAllele length
hg3845525
hg1945547
hg1845543
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418740
SamplesAK1
Known GenesPRSS1
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819176
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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