A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819111



Internal ID15583812
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:122809523..122809752hg38UCSC Ensembl
Innerchr6:123130668..123130897hg19UCSC Ensembl
Innerchr6:123172367..123172596hg18UCSC Ensembl
Cytoband6q22.31
Allele length
AssemblyAllele length
hg38230
hg19230
hg18230
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419326
SamplesAK1
Known GenesSMPDL3A
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819111
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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