A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819102



Internal ID15583803
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrX:56621457..56690583hg38UCSC Ensembl
InnerchrX:56647890..56717016hg19UCSC Ensembl
InnerchrX:56664615..56733741hg18UCSC Ensembl
CytobandXp11.1
Allele length
AssemblyAllele length
hg3869127
hg1969127
hg1869127
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1418755
SamplesAK1
Known Genes
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819102
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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