A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819096



Internal ID15583797
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:188359208..188364373hg38UCSC Ensembl
Innerchr3:188076996..188082161hg19UCSC Ensembl
Innerchr3:189559690..189564855hg18UCSC Ensembl
Cytoband3q28
Allele length
AssemblyAllele length
hg385166
hg195166
hg185166
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419686
SamplesAK1
Known GenesLPP
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819096
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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