A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819052



Internal ID15238335
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr20:5931265..5938364hg38UCSC Ensembl
Innerchr20:5911911..5919010hg19UCSC Ensembl
Innerchr20:5859911..5867010hg18UCSC Ensembl
Cytoband20p12.3
Allele length
AssemblyAllele length
hg387100
hg197100
hg187100
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419804
SamplesAK1
Known GenesTRMT6
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819052
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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