A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819036



Internal ID15583737
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:142928957..142936206hg38UCSC Ensembl
Innerchr6:143250094..143257343hg19UCSC Ensembl
Innerchr6:143291787..143299036hg18UCSC Ensembl
Cytoband6q24.2
Allele length
AssemblyAllele length
hg387250
hg197250
hg187250
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419813
SamplesAK1
Known GenesHIVEP2
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819036
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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