A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv819021



Internal ID15583722
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr12:57746032..57747085hg38UCSC Ensembl
Innerchr12:58139815..58140868hg19UCSC Ensembl
Innerchr12:56426082..56427135hg18UCSC Ensembl
Cytoband12q14.1
Allele length
AssemblyAllele length
hg381054
hg191054
hg181054
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1419162
SamplesAK1
Known GenesTSPAN31
MethodOligo aCGH
AnalysisThe array was scanned with Agilent DNA microarray scanner at 2 micron resolution. The resulting image was extracted by Agilent's Feature Extraction software. The log2 ratios were analyzed using NEXUS software. Each aberration call was manually checked to confirm the accuracy of the calls.
PlatformGSE19651
Comments
ReferenceKim_et_al_2009
Pubmed ID19587683
Accession Number(s)nsv819021
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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