A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv8090



Internal ID15846002
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:56444184..56704830hg38UCSC Ensembl
Outerchr7:56511877..56772523hg19UCSC Ensembl
Outerchr7:56479371..56740017hg18UCSC Ensembl
Outerchr7:56286086..56546732hg17UCSC Ensembl
Cytoband7p11.2
Allele length
AssemblyAllele length
hg38260647
hg19260647
hg18260647
hg17260647
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv17337, nssv15538, nssv16201, nssv15205, nssv15157, nssv14822, nssv17391, nssv14874, nssv15137, nssv17323
SamplesNA11830, NA18980, NA07029, NA18504, NA18563, NA18860, NA18975, NA19132, NA19240, NA19144
Known GenesDKFZp434L192, LOC100240728, LOC101928401, LOC650226
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv8090
Frequency
Sample Size31
Observed Gain0
Observed Loss10
Observed Complex0
Frequencyn/a


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