A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7907



Internal ID15499133
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:61566754..61577097hg38UCSC Ensembl
Outerchr6:62276659..62287002hg19UCSC Ensembl
Outerchr6:62334618..62344961hg18UCSC Ensembl
Outerchr6:62334618..62344961hg17UCSC Ensembl
Cytoband6q11.1
Allele length
AssemblyAllele length
hg3810344
hg1910344
hg1810344
hg1710344
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv13690, nssv14475, nssv14372, nssv14360, nssv15511, nssv13361
SamplesNA07029, NA12802, NA12872, NA18537, NA18853, NA19240
Known GenesMTRNR2L9
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv7907
Frequency
Sample Size31
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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