A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7906



Internal ID15499132
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:57917395..57943795hg38UCSC Ensembl
Outerchr6:58243673..58270073hg19UCSC Ensembl
Outerchr6:58351632..58378032hg18UCSC Ensembl
Outerchr6:58351632..58378032hg17UCSC Ensembl
Cytoband6p11.2
Allele length
AssemblyAllele length
hg3826401
hg1926401
hg1826401
hg1726401
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv13660, nssv15609, nssv15481, nssv16853, nssv15668, nssv15216, nssv14986
SamplesNA12802, NA18972, NA10863, NA12155, NA12740, NA18552, NA19240
Known GenesGUSBP4
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv7906
Frequency
Sample Size31
Observed Gain0
Observed Loss7
Observed Complex0
Frequencyn/a


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