A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7891



Internal ID15845803
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:35776413..35804762hg38UCSC Ensembl
Outerchr6:35744190..35772539hg19UCSC Ensembl
Outerchr6:35852168..35880517hg18UCSC Ensembl
Outerchr6:35852168..35880517hg17UCSC Ensembl
Cytoband6p21.31
Allele length
AssemblyAllele length
hg3828350
hg1928350
hg1828350
hg1728350
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv14527, nssv14366, nssv13369, nssv15578, nssv17054, nssv13570, nssv14275, nssv14823, nssv15391, nssv14909, nssv16407, nssv14908, nssv14255, nssv16393, nssv14300, nssv14926, nssv14445, nssv14704, nssv16491, nssv15852
SamplesNA18502, NA11830, NA18980, NA18504, NA12155, NA12802, NA18860, NA07048, NA10839, NA19007, NA10847, NA18572, NA18537, NA18853, NA19132, NA18517, NA19240, NA19144, NA19173, NA18552
Known GenesCLPS, CLPSL1, CLPSL2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv7891
Frequency
Sample Size31
Observed Gain20
Observed Loss0
Observed Complex0
Frequencyn/a


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