Variant DetailsVariant: nsv7883 | Internal ID | 15845795 | | Landmark | | | Location Information | | | Cytoband | 6p21.32 | | Allele length | | Assembly | Allele length | | hg38 | 224945 | | hg19 | 224945 | | hg18 | 224945 | | hg17 | 224945 |
| | Variant Type | CNV gain+loss | | Copy Number | | | Allele State | | | Allele Origin | | | Probe Count | | | Validation Flag | | | Merged Status | M | | Merged Variants | | | Supporting Variants | nssv16514, nssv14185, nssv16664, nssv15271, nssv14165, nssv13480, nssv16904, nssv13450, nssv15943, nssv14120, nssv14579, nssv14027, nssv16673, nssv14005, nssv15548, nssv16281, nssv14628, nssv15338, nssv16800, nssv16544, nssv14614, nssv15519, nssv14287, nssv14866, nssv15369, nssv14674, nssv16341, nssv16643, nssv15066, nssv16740, nssv14538, nssv14065, nssv16033, nssv14270, nssv16221, nssv14135, nssv17070, nssv14508, nssv13151, nssv16197, nssv13181, nssv16063, nssv16227, nssv16257, nssv13390, nssv13945, nssv14806, nssv14195, nssv16784, nssv14698, nssv15279, nssv14222, nssv14848, nssv14699, nssv14265, nssv16980, nssv14035, nssv14147, nssv16153, nssv14669, nssv15036, nssv14878, nssv13792, nssv16017, nssv16191, nssv16401, nssv14180, nssv14946, nssv16574, nssv16694, nssv14215, nssv15549, nssv17190, nssv15913, nssv14598, nssv17010, nssv14609, nssv14240, nssv13975, nssv14155, nssv16347, nssv14377, nssv14267, nssv14237, nssv14207, nssv14276, nssv15672, nssv16814, nssv16123, nssv16634, nssv14716, nssv14060, nssv14036, nssv15006, nssv14673, nssv13852, nssv16874, nssv14030, nssv14347, nssv15309, nssv14125, nssv13882, nssv14257, nssv15702, nssv14639, nssv13976, nssv13039, nssv16934, nssv16994, nssv14728, nssv15368, nssv16890, nssv16213, nssv16047, nssv14838, nssv14295, nssv14210, nssv14117, nssv14608, nssv13942, nssv16950, nssv15518, nssv16003, nssv16077, nssv14312, nssv13330, nssv15308, nssv14216, nssv17024, nssv13997, nssv16251, nssv15399, nssv14478, nssv13219, nssv14568, nssv15642, nssv14729, nssv14227, nssv14154, nssv13540, nssv14448, nssv14819, nssv13702, nssv13009, nssv16317, nssv13249, nssv16137, nssv16243, nssv13912, nssv13271, nssv15488, nssv13822, nssv14836, nssv14578, nssv14686, nssv14638, nssv13189, nssv14658, nssv13915, nssv13672, nssv15241, nssv16333, nssv14126, nssv13211, nssv14252, nssv14688, nssv13732, nssv17130, nssv16830, nssv14849, nssv13061, nssv14066, nssv15339, nssv15126, nssv13241, nssv15458, nssv14064, nssv14057, nssv16303, nssv14808, nssv14177, nssv14156, nssv16311, nssv14668, nssv14105, nssv15398, nssv16844, nssv14150, nssv13309, nssv14317, nssv15459, nssv13510, nssv13885, nssv16703, nssv14976, nssv16287, nssv13279, nssv15973, nssv13360, nssv14006, nssv14703, nssv14467, nssv16604, nssv16273, nssv14186, nssv16167, nssv14325, nssv16920, nssv14818, nssv14282, nssv14355, nssv14718, nssv16964, nssv14437, nssv12979, nssv16161, nssv13121, nssv13159, nssv15612, nssv14192, nssv13129, nssv17160, nssv14124, nssv16371, nssv16484, nssv16183, nssv14245, nssv14548, nssv14896, nssv15489, nssv14644, nssv14246, nssv12949, nssv17040, nssv15732, nssv14162, nssv14793, nssv13069, nssv16860, nssv16724 | | Samples | NA18502, NA11830, NA18980, NA07029, NA18504, NA12155, NA18563, NA12802, NA18860, NA18942, NA07048, NA10839, NA18975, NA19007, NA10847, NA10863, NA12872, NA18572, NA19221, NA18537, NA18853, NA19132, NA18517, NA18564, NA19240, NA19144, NA12740, NA19173, NA18972, NA18552 | | Known Genes | HLA-DQA1, HLA-DQB1, HLA-DRB1, HLA-DRB5, HLA-DRB6 | | Method | Oligo aCGH | | Analysis | Statistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2 | | Platform | Agilent-015686 Custom Human 244K CGH Microarray | | Comments | | | Reference | Perry_et_al_2008 | | Pubmed ID | 18304495 | | Accession Number(s) | nsv7883
| | Frequency | | Sample Size | 31 | | Observed Gain | 30 | | Observed Loss | 25 | | Observed Complex | 0 | | Frequency | n/a |
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