A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7882



Internal ID15499108
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:32389966..32402035hg38UCSC Ensembl
Outerchr6:32357743..32369812hg19UCSC Ensembl
Outerchr6:32465721..32477790hg18UCSC Ensembl
Outerchr6:32465721..32477790hg17UCSC Ensembl
Cytoband6p21.32
Allele length
AssemblyAllele length
hg3812070
hg1912070
hg1812070
hg1712070
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv16613, nssv13642
SamplesNA18972, NA18942
Known GenesBTNL2, HCG23
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nsv7882
Frequency
Sample Size31
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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