A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7649



Internal ID15552679
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:3211044..3362675hg38UCSC Ensembl
Outerchr11:3232274..3383905hg19UCSC Ensembl
Outerchr11:3188850..3340481hg18UCSC Ensembl
Outerchr11:3188850..3340481hg17UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg38151632
hg19151632
hg18151632
hg17151632
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv987, nssv1923, nssv10794, nssv5343, nssv3920, nssv6439, nssv9814, nssv10795, nssv3919, nssv1924
SamplesNA18507, NA12156, NA12878, NA18956, NA18555, NA19240, NA19129
Known GenesMRGPRE, MRGPRG, MRGPRG-AS1, ZNF195
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv7649
Frequency
Sample Size9
Observed Gain0
Observed Loss7
Observed Complex0
Frequencyn/a


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