A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7643



Internal ID15205987
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:1867726..1927695hg38UCSC Ensembl
Outerchr11:1888956..1948925hg19UCSC Ensembl
Outerchr11:1845532..1905501hg18UCSC Ensembl
Outerchr11:1845532..1905501hg17UCSC Ensembl
Cytoband11p15.5
Allele length
AssemblyAllele length
hg3859970
hg1959970
hg1859970
hg1759970
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv981, nssv10883, nssv1920, nssv6435, nssv5338, nssv9812, nssv3916, nssv9265
SamplesNA18517, NA18507, NA15510, NA19129, NA12156, NA12878, NA19240, NA18555
Known GenesLSP1, TNNT3
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv7643
Frequency
Sample Size9
Observed Gain0
Observed Loss8
Observed Complex0
Frequencyn/a


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