A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7552



Internal ID15205887
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:112340440..112383097hg38UCSC Ensembl
Outerchr10:114100198..114142855hg19UCSC Ensembl
Outerchr10:114090188..114132845hg18UCSC Ensembl
Outerchr10:114090188..114132845hg17UCSC Ensembl
Cytoband10q25.2
Allele length
AssemblyAllele length
hg3842658
hg1942658
hg1842658
hg1742658
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3900, nssv5319, nssv6417, nssv966
SamplesNA19129, NA12156, NA12878, NA19240
Known GenesACSL5, GUCY2GP
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv7552
Frequency
Sample Size9
Observed Gain0
Observed Loss4
Observed Complex0
Frequencyn/a


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