A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7473



Internal ID15205800
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrY:6220487..9936872hg38UCSC Ensembl
OuterchrY:6088528..9774481hg19UCSC Ensembl
OuterchrY:6148528..10384481hg18UCSC Ensembl
OuterchrY:6131889..10367842hg17UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg383716386
hg193685954
hg184235954
hg174235954
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv9931, nssv9788
SamplesNA18507
Known GenesAMELY, FAM197Y2, FAM197Y5, PRKY, RBMY1A3P, RBMY3AP, TBL1Y, TSPY1, TSPY10, TSPY2, TSPY3, TSPY4, TSPY8, TTTY1, TTTY11, TTTY12, TTTY16, TTTY18, TTTY19, TTTY1B, TTTY2, TTTY20, TTTY21, TTTY21B, TTTY22, TTTY23, TTTY23B, TTTY2B, TTTY7, TTTY7B, TTTY8, TTTY8B
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv7473
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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