A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7446



Internal ID15205770
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:52661863..52825007hg38UCSC Ensembl
OuterchrX:52690913..52854056hg19UCSC Ensembl
OuterchrX:52707638..52870781hg18UCSC Ensembl
OuterchrX:52573934..52737077hg17UCSC Ensembl
CytobandXp11.22
Allele length
AssemblyAllele length
hg38163145
hg19163144
hg18163144
hg17163144
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3788, nssv10709, nssv10710, nssv5227, nssv1839, nssv873
SamplesNA12878, NA18956, NA18555, NA19240, NA19129
Known GenesSPANXN5, SSX2, SSX2B, XAGE5
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv7446
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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