A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7260



Internal ID15205566
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:20042576..22472558hg38UCSC Ensembl
Outerchr15:20247829..22781821hg19UCSC Ensembl
Outerchr15:18507843..20333185hg18UCSC Ensembl
Outerchr15:18507843..20333185hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg382429983
hg192533993
hg181825343
hg171825343
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv4139, nssv10040, nssv9511, nssv1237, nssv9510, nssv10924, nssv9304, nssv1239, nssv10922, nssv6623, nssv5538, nssv5536, nssv9305, nssv10041, nssv2097, nssv6622, nssv1238, nssv1232, nssv5535, nssv10925
SamplesNA18517, NA18507, NA15510, NA18956, NA19129, NA12156, NA12878, NA19240, NA18555
Known GenesCHEK2P2, CT60, CXADRP2, GOLGA6L1, GOLGA6L6, GOLGA8CP, GOLGA8DP, HERC2P3, LOC646214, LOC727924, MIR4509-1, MIR4509-2, MIR4509-3, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv7260
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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