A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7211



Internal ID5091342
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:108617417..118351740hg19UCSC Ensembl
Outerchr10:108607407..118341730hg18UCSC Ensembl
Outerchr10:108607407..118341730hg17UCSC Ensembl
Cytoband10q25.1
Allele length
AssemblyAllele length
hg19n/a
hg18n/a
hg17n/a
Variant TypeOTHER Inversion
Copy Number
Allele State
Allele OriginNot tested
Probe Count
Merged StatusM
Merged Variants
Supporting Variantsnssv9805, nssv11242
SamplesNA18507, NA15510
Known GenesABLIM1, ACSL5, ADD3, ADRA2A, ADRB1, AFAP1L2, ATRNL1, BBIP1, C10orf118, C10orf81, C10orf96, CASP7, DCLRE1A, DUSP5, FAM160B1, GFRA1, GPAM, GUCY2GP, HABP2, LOC100505933, LOC143188, LOC282997, MIR2110, MIR4295, MIR4483, MIR4680, MXI1, NHLRC2, NRAP, PDCD4, PNLIP, PNLIPRP1, PNLIPRP3, RBM20, RPL13AP6, SHOC2, SMC3, SMNDC1, SORCS1, TCF7L2, TDRD1, TECTB, TRUB1, VTI1A, VWA2, XPNPEP1, ZDHHC6
Method
AnalysisSample level sites were merged to generate a set of non-redundant variant regions. Two non-redundant inversion variants (chr 2 positions 89438708-89655419 and 89958869-91208466) were corrected from the original publication for coordinates and associated sample-level data.
PlatformCapillary
Comments
ReferenceKidd et al 2008
Pubmed ID18451855
Accession Number(s)nsv7211
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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