A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7203



Internal ID8519171
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:46692238..51472468hg19UCSC Ensembl
Outerchr10:46112244..51142474hg18UCSC Ensembl
Outerchr10:46112244..51142474hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg194780231
hg185030231
hg175030231
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv11239, nssv9796, nssv3875, nssv862, nssv1894, nssv6394, nssv9797, nssv10756, nssv5289, nssv872, nssv3876, nssv892, nssv5290, nssv6395, nssv10755
SamplesNA18507, NA15510, NA18956, NA19129, NA12156, NA12878, NA19240, NA18555
Known GenesAGAP7, AGAP8, AGAP9, ANTXRL, ANTXRLP1, ANXA8, ANXA8L1, ANXA8L2, ARHGAP22, BMS1P1, BMS1P2, BMS1P5, BMS1P6, C10orf128, C10orf53, C10orf71, C10orf71-AS1, CHAT, CTGLF12P, CTSLP2, DRGX, ERCC6, ERCC6-PGBD3, FAM170B, FAM170B-AS1, FAM21B, FAM25B, FAM25C, FAM25G, FAM35BP, FAM35DP, FRMPD2, FRMPD2P1, GDF10, GDF2, GLUD1P7, GPRIN2, HNRNPA1P33, LINC00842, LOC100996758, LOC728407, LRRC18, MAPK8, MIR4294, NPY4R, OGDHL, PARG, PGBD3, PTPN20A, PTPN20B, RBP3, SLC18A3, SYT15, VSTM4, WDFY4, ZNF488
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv7203
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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