A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7203



Internal ID5091142
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:46692238..51472468hg19UCSC Ensembl
Outerchr10:46112244..51142474hg18UCSC Ensembl
Outerchr10:46112244..51142474hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg19n/a
hg18n/a
hg17n/a
Variant TypeOTHER Inversion
Copy Number
Allele State
Allele OriginNot tested
Probe Count
Merged StatusM
Merged Variants
Supporting Variantsnssv11239, nssv9796, nssv862, nssv3875, nssv1894, nssv6394, nssv9797, nssv10756, nssv5289, nssv872, nssv3876, nssv892, nssv5290, nssv6395, nssv10755
SamplesNA18507, NA15510, NA18956, NA19129, NA12156, NA12878, NA19240, NA18555
Known GenesAGAP7, AGAP8, AGAP9, ANTXRL, ANXA8, ANXA8L1, ANXA8L2, ARHGAP22, BMS1P1, BMS1P5, C10orf128, C10orf53, C10orf71, CHAT, CTSL1P2, DRGX, ERCC6, FAM170B, FAM21B, FAM25B, FAM25C, FAM25G, FAM35B, FAM35B2, FRMPD2, FRMPD2P1, GDF10, GDF2, GPRIN2, LOC100506733, LOC399753, LOC642826, LOC643650, LOC728407, LOC728643, LRRC18, MAPK8, MIR4294, OGDHL, PARG, PGBD3, PPYR1, PTPN20A, PTPN20B, RBP3, SLC18A3, SYT15, VSTM4, WDFY4, ZNF488
Method
AnalysisSample level sites were merged to generate a set of non-redundant variant regions. Two non-redundant inversion variants (chr 2 positions 89438708-89655419 and 89958869-91208466) were corrected from the original publication for coordinates and associated sample-level data.
PlatformCapillary
Comments
ReferenceKidd et al 2008
Pubmed ID18451855
Accession Number(s)nsv7203
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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