A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv7182



Internal ID15205480
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:149801682..149894958hg38UCSC Ensembl
Outerchr1:149773238..149866512hg19UCSC Ensembl
Outerchr1:148039862..148133136hg18UCSC Ensembl
Outerchr1:146586311..146679585hg17UCSC Ensembl
Cytoband1q21.2
Allele length
AssemblyAllele length
hg3893277
hg1993275
hg1893275
hg1793275
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv7036, nssv1527, nssv2522, nssv7042, nssv11074
SamplesNA12156, NA15510, NA18555, NA19240
Known GenesHIST2H2AA3, HIST2H2AA4, HIST2H2AB, HIST2H2AC, HIST2H2BC, HIST2H2BE, HIST2H2BF, HIST2H3A, HIST2H3C, HIST2H3D, HIST2H4A, HIST2H4B
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nsv7182
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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